Read MINC1 format images
Minc1File(mincfile) | Class to wrap MINC1 format opened netcdf object |
Minc1Image(dataobj, affine[, header, extra, ...]) | Class for MINC1 format images |
MincError | Error when reading MINC files |
MincFile(*args, **kwargs) | Deprecated alternative name for Minc1File |
MincHeader([data_dtype, shape, zooms]) | Class to contain header for MINC formats |
MincImage(*args, **kwargs) | Deprecated alternative name for Minc1Image |
MincImageArrayProxy(minc_file) | MINC implementation of array proxy protocol |
Bases: object
Class to wrap MINC1 format opened netcdf object
Although it has some of the same methods as a Header, we use this only when reading a MINC file, to pull out useful header information, and for the method of reading the data out
Return scaled data for slice definition sliceobj
Parameters: | sliceobj : tuple, optional
|
---|---|
Returns: | scaled_arr : array
|
Get real-world sizes of voxels
Bases: nibabel.spatialimages.SpatialImage
Class for MINC1 format images
The MINC1 image class uses the default header type, rather than a specific MINC header type - and reads the relevant information from the MINC file on load.
Initialize image
The image is a combination of (array, affine matrix, header), with optional metadata in extra, and filename / file-like objects contained in the file_map mapping.
Parameters: | dataobj : object
affine : None or (4,4) array-like
header : None or mapping or header instance, optional
extra : None or mapping, optional
file_map : mapping, optional
|
---|
Initialize image
The image is a combination of (array, affine matrix, header), with optional metadata in extra, and filename / file-like objects contained in the file_map mapping.
Parameters: | dataobj : object
affine : None or (4,4) array-like
header : None or mapping or header instance, optional
extra : None or mapping, optional
file_map : mapping, optional
|
---|
alias of MincImageArrayProxy
alias of MincHeader
Bases: nibabel.deprecated.FutureWarningMixin, nibabel.minc1.Minc1File
Deprecated alternative name for Minc1File
Bases: nibabel.spatialimages.Header
Class to contain header for MINC formats
See Header class for an implementation we can’t use
See Header class for an implementation we can’t use
Bases: nibabel.deprecated.FutureWarningMixin, nibabel.minc1.Minc1Image
Deprecated alternative name for Minc1Image